Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.45■□□□□ 0.7
CAPN6Q9Y6Q1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN6Q9Y6Q1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN6Q9Y6Q1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 AC106820.2-201ENST00000563775 3264 ntBASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 AF186192.3-201ENST00000583427 947 ntBASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.44■□□□□ 0.7
CAPN6Q9Y6Q1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CAPN6Q9Y6Q1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 KRT18P6-201ENST00000555540 1265 ntBASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 AC006058.3-201ENST00000606217 1069 ntBASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 AP000692.2-201ENST00000608391 879 ntBASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CAPN6Q9Y6Q1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms