Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 NKAPP1-205ENST00000585790 367 ntBASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 AC239800.4-201ENST00000603712 296 ntBASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 AC064836.3-201ENST00000607928 673 ntBASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 Z98044.1-201ENST00000632503 1764 ntBASIC20.64■□□□□ 0.9
PTCH2Q9Y6C5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTCH2Q9Y6C5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PTCH2Q9Y6C5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PTCH2Q9Y6C5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PTCH2Q9Y6C5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTCH2Q9Y6C5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.64■□□□□ 0.9
PTCH2Q9Y6C5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 AC113404.2-201ENST00000507884 177 ntBASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 AC005829.1-201ENST00000570002 483 ntBASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCH2Q9Y6C5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 AL645939.2-201ENST00000427340 991 ntBASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 YBX1P5-201ENST00000509441 847 ntBASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 MIR4469-201ENST00000583919 79 ntBASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCH2Q9Y6C5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 MCCD1P2-201ENST00000423228 335 ntBASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 ALG1L5P-201ENST00000482043 771 ntBASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 AC068587.9-201ENST00000641814 219 ntBASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCH2Q9Y6C5 AC125634.1-201ENST00000438758 1403 ntBASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 FEM1AP3-201ENST00000403722 1741 ntBASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms