Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 AC012313.10-201ENST00000623509 926 ntBASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 AC112497.1-201ENST00000624824 639 ntBASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PCDHGA3Q9Y5H0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 HLA-F-220ENST00000434407 884 ntBASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 AL133373.2-201ENST00000623187 2828 ntBASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA3Q9Y5H0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 CROCCP3-202ENST00000420820 1947 ntBASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 KRT8P26-201ENST00000534154 1276 ntBASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 MIR3180-1-201ENST00000580374 94 ntBASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 MIR3917-201ENST00000580971 93 ntBASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 MIR3180-3-201ENST00000584616 94 ntBASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 AC093525.10-201ENST00000625130 1569 ntBASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 AC020916.1-201ENST00000587762 1774 ntBASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 KRT8P7-201ENST00000533003 1432 ntBASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA3Q9Y5H0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA3Q9Y5H0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA3Q9Y5H0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA3Q9Y5H0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA3Q9Y5H0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA3Q9Y5H0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA3Q9Y5H0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGA3Q9Y5H0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms