Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 SDHAP2-201ENST00000455183 2001 ntBASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 YBX1P2-201ENST00000489612 999 ntBASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 AC034232.1-201ENST00000506026 1064 ntBASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 AL441883.1-201ENST00000566170 1045 ntBASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHB13Q9Y5F0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PCDHB13Q9Y5F0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB13Q9Y5F0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB13Q9Y5F0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB13Q9Y5F0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 RCN1P1-201ENST00000400413 996 ntBASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 AC117947.1-201ENST00000427448 529 ntBASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHB13Q9Y5F0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 BCL2-203ENST00000589955 5011 ntBASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB13Q9Y5F0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 RNF152P1-201ENST00000397754 604 ntBASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 TSPY5P-201ENST00000426936 936 ntBASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms