Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 AC012317.2-201ENST00000623305 2251 ntBASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 AC073195.1-201ENST00000607241 877 ntBASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.01■□□□□ 0.95
R3HCC1Q9Y3T6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 AC233702.5-201ENST00000584107 538 ntBASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3HCC1Q9Y3T6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 KSR1P1-201ENST00000446298 240 ntBASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 Z99916.2-201ENST00000604037 246 ntBASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 AL353708.3-201ENST00000610272 989 ntBASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3HCC1Q9Y3T6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms