Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 INGX-201ENST00000359239 846 ntBASIC17.29■□□□□ 0.36
RNF6Q9Y252 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 HLA-A-209ENST00000638375 975 ntBASIC17.29■□□□□ 0.36
RNF6Q9Y252 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RNF6Q9Y252 BCL2-203ENST00000589955 5011 ntBASIC17.29■□□□□ 0.36
RNF6Q9Y252 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF6Q9Y252 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 AC004951.3-201ENST00000418645 1148 ntBASIC17.28■□□□□ 0.36
RNF6Q9Y252 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 FAM87A-204ENST00000613235 858 ntBASIC17.28■□□□□ 0.36
RNF6Q9Y252 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 AC012313.1-201ENST00000593393 3059 ntBASIC17.28■□□□□ 0.36
RNF6Q9Y252 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF6Q9Y252 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF6Q9Y252 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF6Q9Y252 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF6Q9Y252 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF6Q9Y252 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF6Q9Y252 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF6Q9Y252 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF6Q9Y252 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF6Q9Y252 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF6Q9Y252 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF6Q9Y252 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms