Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 AC190387.1-201ENST00000551683 408 ntBASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 AL390955.2-201ENST00000603032 514 ntBASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 AC012645.4-201ENST00000610691 1061 ntBASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
COL17A1Q9UMD9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 GK-202ENST00000378941 458 ntTSL 3 BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 MEIS3P1-201ENST00000495167 958 ntBASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
COL17A1Q9UMD9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
COL17A1Q9UMD9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
COL17A1Q9UMD9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
COL17A1Q9UMD9 STOM-202ENST00000347359 870 ntTSL 2 BASIC27.64■■■□□ 2.01
COL17A1Q9UMD9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
COL17A1Q9UMD9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC27.64■■■□□ 2.01
COL17A1Q9UMD9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
COL17A1Q9UMD9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC27.63■■■□□ 2.01
COL17A1Q9UMD9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 TCF3P1-201ENST00000423021 1937 ntBASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 MTCL1P1-201ENST00000446207 792 ntBASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 BX005266.1-201ENST00000473402 457 ntBASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 AC005593.1-201ENST00000624894 515 ntBASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 AC063926.2-201ENST00000623766 1308 ntBASIC27.62■■■□□ 2.01
COL17A1Q9UMD9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms