Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN1Q9P244 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN1Q9P244 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN1Q9P244 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN1Q9P244 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN1Q9P244 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN1Q9P244 KRT89P-201ENST00000620027 1478 ntBASIC16.82■□□□□ 0.28
LRFN1Q9P244 AC009102.3-201ENST00000623118 1491 ntBASIC16.82■□□□□ 0.28
LRFN1Q9P244 AC112777.1-201ENST00000540175 1423 ntBASIC16.82■□□□□ 0.28
LRFN1Q9P244 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 DRAXINP1-201ENST00000437611 948 ntBASIC16.82■□□□□ 0.28
LRFN1Q9P244 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 LINC00265-3P-201ENST00000447588 903 ntBASIC16.82■□□□□ 0.28
LRFN1Q9P244 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 AL691432.3-201ENST00000621860 400 ntBASIC16.82■□□□□ 0.28
LRFN1Q9P244 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN1Q9P244 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.82■□□□□ 0.28
LRFN1Q9P244 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN1Q9P244 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN1Q9P244 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 MYLKP1-201ENST00000509077 1580 ntBASIC16.81■□□□□ 0.28
LRFN1Q9P244 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 AP000867.3-201ENST00000524675 377 ntBASIC16.81■□□□□ 0.28
LRFN1Q9P244 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 TPSP2-201ENST00000561760 610 ntBASIC16.81■□□□□ 0.28
LRFN1Q9P244 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN1Q9P244 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN1Q9P244 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
LRFN1Q9P244 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.8■□□□□ 0.28
LRFN1Q9P244 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
LRFN1Q9P244 TOB2P1-201ENST00000469761 992 ntBASIC16.8■□□□□ 0.28
LRFN1Q9P244 GUSBP12-201ENST00000513727 720 ntBASIC16.8■□□□□ 0.28
LRFN1Q9P244 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.8■□□□□ 0.28
LRFN1Q9P244 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.8■□□□□ 0.28
LRFN1Q9P244 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.8■□□□□ 0.28
LRFN1Q9P244 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.8■□□□□ 0.28
LRFN1Q9P244 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.8■□□□□ 0.28
LRFN1Q9P244 AC099343.3-201ENST00000605834 2503 ntBASIC16.8■□□□□ 0.28
LRFN1Q9P244 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.8■□□□□ 0.28
LRFN1Q9P244 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN1Q9P244 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms