Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CNTN3Q9P232 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CNTN3Q9P232 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 DUSP5P1-201ENST00000441325 1139 ntBASIC19.7■□□□□ 0.74
CNTN3Q9P232 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.7■□□□□ 0.74
CNTN3Q9P232 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CNTN3Q9P232 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTN3Q9P232 AL592071.1-201ENST00000611956 408 ntBASIC19.7■□□□□ 0.74
CNTN3Q9P232 IGHV3-41-201ENST00000613121 348 ntBASIC19.7■□□□□ 0.74
CNTN3Q9P232 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTN3Q9P232 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CNTN3Q9P232 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CNTN3Q9P232 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTN3Q9P232 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTN3Q9P232 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CNTN3Q9P232 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTN3Q9P232 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CNTN3Q9P232 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.68■□□□□ 0.74
CNTN3Q9P232 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CNTN3Q9P232 AC073592.3-201ENST00000625118 1834 ntBASIC19.68■□□□□ 0.74
CNTN3Q9P232 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.68■□□□□ 0.74
CNTN3Q9P232 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.68■□□□□ 0.74
CNTN3Q9P232 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.68■□□□□ 0.74
CNTN3Q9P232 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.68■□□□□ 0.74
CNTN3Q9P232 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.68■□□□□ 0.74
CNTN3Q9P232 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.68■□□□□ 0.74
CNTN3Q9P232 GUSBP12-201ENST00000513727 720 ntBASIC19.68■□□□□ 0.74
CNTN3Q9P232 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.68■□□□□ 0.74
CNTN3Q9P232 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNTN3Q9P232 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CNTN3Q9P232 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNTN3Q9P232 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTN3Q9P232 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CNTN3Q9P232 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTN3Q9P232 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTN3Q9P232 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNTN3Q9P232 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CNTN3Q9P232 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNTN3Q9P232 TOB2P1-201ENST00000469761 992 ntBASIC19.67■□□□□ 0.74
CNTN3Q9P232 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.67■□□□□ 0.74
CNTN3Q9P232 MIR3652-201ENST00000579335 131 ntBASIC19.67■□□□□ 0.74
CNTN3Q9P232 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.67■□□□□ 0.74
CNTN3Q9P232 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNTN3Q9P232 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.67■□□□□ 0.74
CNTN3Q9P232 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CNTN3Q9P232 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.67■□□□□ 0.74
CNTN3Q9P232 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.67■□□□□ 0.74
CNTN3Q9P232 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms