Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
HACD3Q9P035 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HACD3Q9P035 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.57■□□□□ 0.56
HACD3Q9P035 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.57■□□□□ 0.56
HACD3Q9P035 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HACD3Q9P035 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.57■□□□□ 0.56
HACD3Q9P035 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.57■□□□□ 0.56
HACD3Q9P035 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.57■□□□□ 0.56
HACD3Q9P035 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.57■□□□□ 0.56
HACD3Q9P035 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.57■□□□□ 0.56
HACD3Q9P035 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.57■□□□□ 0.56
HACD3Q9P035 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.57■□□□□ 0.56
HACD3Q9P035 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HACD3Q9P035 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.57■□□□□ 0.56
HACD3Q9P035 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.57■□□□□ 0.56
HACD3Q9P035 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HACD3Q9P035 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.57■□□□□ 0.56
HACD3Q9P035 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HACD3Q9P035 AC009113.1-201ENST00000570267 2443 ntBASIC18.57■□□□□ 0.56
HACD3Q9P035 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.56■□□□□ 0.56
HACD3Q9P035 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.56■□□□□ 0.56
HACD3Q9P035 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HACD3Q9P035 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.56■□□□□ 0.56
HACD3Q9P035 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 TERF1P1-201ENST00000311003 1181 ntBASIC18.56■□□□□ 0.56
HACD3Q9P035 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.56■□□□□ 0.56
HACD3Q9P035 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
HACD3Q9P035 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.56■□□□□ 0.56
HACD3Q9P035 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.56■□□□□ 0.56
HACD3Q9P035 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.56■□□□□ 0.56
HACD3Q9P035 AC010203.1-204ENST00000548782 407 ntBASIC18.56■□□□□ 0.56
HACD3Q9P035 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.56■□□□□ 0.56
HACD3Q9P035 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.56■□□□□ 0.56
HACD3Q9P035 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.56■□□□□ 0.56
HACD3Q9P035 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.56■□□□□ 0.56
HACD3Q9P035 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 AL031432.5-201ENST00000641059 760 ntBASIC18.56■□□□□ 0.56
HACD3Q9P035 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.56■□□□□ 0.56
HACD3Q9P035 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
HACD3Q9P035 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 AC126763.1-201ENST00000552015 2118 ntBASIC18.56■□□□□ 0.56
HACD3Q9P035 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HACD3Q9P035 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.56■□□□□ 0.56
HACD3Q9P035 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HACD3Q9P035 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.55■□□□□ 0.56
HACD3Q9P035 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HACD3Q9P035 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 AL163051.1-201ENST00000569214 1512 ntBASIC18.55■□□□□ 0.56
HACD3Q9P035 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.55■□□□□ 0.56
HACD3Q9P035 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.55■□□□□ 0.56
HACD3Q9P035 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HACD3Q9P035 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.55■□□□□ 0.56
HACD3Q9P035 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.55■□□□□ 0.56
HACD3Q9P035 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
HACD3Q9P035 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
HACD3Q9P035 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.55■□□□□ 0.56
HACD3Q9P035 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.55■□□□□ 0.56
HACD3Q9P035 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.55■□□□□ 0.56
HACD3Q9P035 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.55■□□□□ 0.56
HACD3Q9P035 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.55■□□□□ 0.56
HACD3Q9P035 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.55■□□□□ 0.56
HACD3Q9P035 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HACD3Q9P035 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HACD3Q9P035 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms