Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SPHK1Q9NYA1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SPHK1Q9NYA1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 AP003733.1-201ENST00000491725 852 ntBASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 AC104581.1-202ENST00000635932 2618 ntBASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPHK1Q9NYA1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 AC005332.3-201ENST00000589904 676 ntBASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPHK1Q9NYA1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 Z83836.1-201ENST00000624605 1642 ntBASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPHK1Q9NYA1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms