Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL357033.4-201ENST00000617703 1807 ntBASIC17.77■□□□□ 0.44
NDE1Q9NXR1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 FER1L4-210ENST00000615531 5998 ntBASIC17.77■□□□□ 0.44
NDE1Q9NXR1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDE1Q9NXR1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
NDE1Q9NXR1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDE1Q9NXR1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDE1Q9NXR1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDE1Q9NXR1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
NDE1Q9NXR1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.77■□□□□ 0.43
NDE1Q9NXR1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDE1Q9NXR1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 AC046158.3-201ENST00000624947 2558 ntBASIC17.76■□□□□ 0.43
NDE1Q9NXR1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 PP12613-201ENST00000424958 2230 ntBASIC17.76■□□□□ 0.43
NDE1Q9NXR1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDE1Q9NXR1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 MYLKP1-201ENST00000509077 1580 ntBASIC17.75■□□□□ 0.43
NDE1Q9NXR1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 KRT8P3-201ENST00000519669 1449 ntBASIC17.75■□□□□ 0.43
NDE1Q9NXR1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 ZNRF2P3-201ENST00000424200 374 ntBASIC17.75■□□□□ 0.43
NDE1Q9NXR1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDE1Q9NXR1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms