Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM248Q9NWD8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 PHGDH-209ENST00000641074 1780 ntBASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 AP003733.1-201ENST00000491725 852 ntBASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM248Q9NWD8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
TMEM248Q9NWD8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 AC135776.1-201ENST00000319817 2481 ntBASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 AC116407.4-201ENST00000623319 1061 ntBASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM248Q9NWD8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 IGHGP-201ENST00000390555 1178 ntBASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 PCED1CP-201ENST00000419887 785 ntBASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM248Q9NWD8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms