Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 TSPY12P-201ENST00000421279 868 ntBASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 AC068472.1-201ENST00000474589 881 ntBASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 REXO1L6P-202ENST00000619970 1078 ntBASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 LINC00602-201ENST00000629776 2065 ntBASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 ANO7L1-203ENST00000602586 1720 ntBASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 AC096582.2-201ENST00000510860 516 ntBASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
FBXO28Q9NVF7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 SAPCD2P3-201ENST00000455031 850 ntBASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 TP73-AS1-207ENST00000624167 988 ntBASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
FBXO28Q9NVF7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 AC106795.1-205ENST00000512851 1056 ntBASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
FBXO28Q9NVF7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms