Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 LINC01711-201ENST00000598340 967 ntBASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 NME4-212ENST00000621774 904 ntTSL 3 BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 AP000523.1-201ENST00000398242 1049 ntBASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 GCSHP2-201ENST00000560971 527 ntBASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 AC091304.2-201ENST00000564639 760 ntBASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 AL355385.1-201ENST00000606123 409 ntBASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 BX640515.1-201ENST00000617215 977 ntBASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC27.29■■□□□ 1.96
SCAF1Q9H7N4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 H19-201ENST00000411754 1788 ntTSL 5 BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 MIR574-201ENST00000385209 96 ntBASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC27.28■■□□□ 1.96
SCAF1Q9H7N4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 BICD1-207ENST00000551848 1962 ntBASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 AL121672.3-201ENST00000608644 468 ntBASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SCAF1Q9H7N4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC27.26■■□□□ 1.96
SCAF1Q9H7N4 AC084018.2-201ENST00000613093 2607 ntBASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 TSPY19P-201ENST00000418461 509 ntBASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 TSPY18P-201ENST00000441642 509 ntBASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 PENK-208ENST00000523051 772 ntTSL 5 BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 AP003041.3-201ENST00000527151 707 ntBASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 AP002414.4-201ENST00000589764 1148 ntBASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 KRT18P1-202ENST00000452408 1331 ntBASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 AC016734.2-201ENST00000624325 1377 ntBASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SCAF1Q9H7N4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms