Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.55■□□□□ 0.4
PIF1Q9H611 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.55■□□□□ 0.4
PIF1Q9H611 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
PIF1Q9H611 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
PIF1Q9H611 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 KRASP1-201ENST00000407852 552 ntBASIC17.55■□□□□ 0.4
PIF1Q9H611 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.55■□□□□ 0.4
PIF1Q9H611 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.55■□□□□ 0.4
PIF1Q9H611 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.55■□□□□ 0.4
PIF1Q9H611 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.55■□□□□ 0.4
PIF1Q9H611 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.55■□□□□ 0.4
PIF1Q9H611 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.55■□□□□ 0.4
PIF1Q9H611 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PIF1Q9H611 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIF1Q9H611 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.55■□□□□ 0.4
PIF1Q9H611 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.54■□□□□ 0.4
PIF1Q9H611 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PIF1Q9H611 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.54■□□□□ 0.4
PIF1Q9H611 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.54■□□□□ 0.4
PIF1Q9H611 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.54■□□□□ 0.4
PIF1Q9H611 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.54■□□□□ 0.4
PIF1Q9H611 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.54■□□□□ 0.4
PIF1Q9H611 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.54■□□□□ 0.4
PIF1Q9H611 ITM2C-210ENST00000620962 501 ntBASIC17.54■□□□□ 0.4
PIF1Q9H611 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.54■□□□□ 0.4
PIF1Q9H611 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PIF1Q9H611 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.54■□□□□ 0.4
PIF1Q9H611 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PIF1Q9H611 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.54■□□□□ 0.4
PIF1Q9H611 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.54■□□□□ 0.4
PIF1Q9H611 KRT8P3-201ENST00000519669 1449 ntBASIC17.54■□□□□ 0.4
PIF1Q9H611 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.54■□□□□ 0.4
PIF1Q9H611 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PIF1Q9H611 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIF1Q9H611 AC008556.1-201ENST00000610908 2040 ntBASIC17.54■□□□□ 0.4
PIF1Q9H611 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PIF1Q9H611 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIF1Q9H611 RCC2P3-201ENST00000418112 1537 ntBASIC17.53■□□□□ 0.4
PIF1Q9H611 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PIF1Q9H611 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.53■□□□□ 0.4
PIF1Q9H611 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PIF1Q9H611 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIF1Q9H611 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PIF1Q9H611 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PIF1Q9H611 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.53■□□□□ 0.4
PIF1Q9H611 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PIF1Q9H611 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.53■□□□□ 0.4
PIF1Q9H611 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PIF1Q9H611 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PIF1Q9H611 KRT8P45-201ENST00000414328 1447 ntBASIC17.53■□□□□ 0.4
PIF1Q9H611 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PIF1Q9H611 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PIF1Q9H611 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIF1Q9H611 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PIF1Q9H611 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PIF1Q9H611 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PIF1Q9H611 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PIF1Q9H611 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.52■□□□□ 0.4
PIF1Q9H611 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.52■□□□□ 0.4
PIF1Q9H611 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PIF1Q9H611 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PIF1Q9H611 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PIF1Q9H611 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PIF1Q9H611 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PIF1Q9H611 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PIF1Q9H611 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PIF1Q9H611 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.52■□□□□ 0.4
PIF1Q9H611 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PIF1Q9H611 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.52■□□□□ 0.4
PIF1Q9H611 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PIF1Q9H611 AC133681.1-201ENST00000465482 601 ntBASIC17.52■□□□□ 0.4
PIF1Q9H611 RN7SL471P-201ENST00000580476 299 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms