Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 TSPY19P-201ENST00000418461 509 ntBASIC19.76■□□□□ 0.75
NXF3Q9H4D5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 IGHV3-47-201ENST00000425060 335 ntBASIC19.76■□□□□ 0.75
NXF3Q9H4D5 TPM4P1-201ENST00000436100 807 ntBASIC19.76■□□□□ 0.75
NXF3Q9H4D5 TSPY18P-201ENST00000441642 509 ntBASIC19.76■□□□□ 0.75
NXF3Q9H4D5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 AC111152.3-201ENST00000569699 673 ntBASIC19.76■□□□□ 0.75
NXF3Q9H4D5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 AC008687.5-201ENST00000593746 558 ntBASIC19.76■□□□□ 0.75
NXF3Q9H4D5 IFNL4P1-201ENST00000607083 540 ntBASIC19.76■□□□□ 0.75
NXF3Q9H4D5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 AC099336.1-202ENST00000602961 463 ntBASIC19.75■□□□□ 0.75
NXF3Q9H4D5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NXF3Q9H4D5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.74■□□□□ 0.75
NXF3Q9H4D5 NSUN5P1-202ENST00000421140 1535 ntBASIC19.74■□□□□ 0.75
NXF3Q9H4D5 NSUN5P2-203ENST00000457352 1529 ntBASIC19.74■□□□□ 0.75
NXF3Q9H4D5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 LINC00602-201ENST00000629776 2065 ntBASIC19.74■□□□□ 0.75
NXF3Q9H4D5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NXF3Q9H4D5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms