Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 KLHL24-204ENST00000454495 603 ntTSL 324.49■■□□□ 1.512e-6■■■□□ 17.2
XRN2Q9H0D6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC24.13■■□□□ 1.451e-7■■■□□ 17.2
XRN2Q9H0D6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.311e-7■■■□□ 17.2
XRN2Q9H0D6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.31e-7■■■□□ 17.2
XRN2Q9H0D6 KLHL24-202ENST00000427201 562 ntTSL 423.07■■□□□ 1.282e-6■■■□□ 17.2
XRN2Q9H0D6 KLHL24-206ENST00000461813 587 ntTSL 423.07■■□□□ 1.282e-6■■■□□ 17.2
XRN2Q9H0D6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.211e-7■■■□□ 17.2
XRN2Q9H0D6 KLHL24-209ENST00000473045 542 ntTSL 422.51■■□□□ 1.192e-6■■■□□ 17.2
XRN2Q9H0D6 PPM1B-208ENST00000419807 2084 ntTSL 522.45■■□□□ 1.181e-7■■■□□ 17.2
XRN2Q9H0D6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.185e-12■■■□□ 17.2
XRN2Q9H0D6 PPM1B-207ENST00000409486 1481 ntTSL 1 (best)22.24■■□□□ 1.151e-7■■■□□ 17.2
XRN2Q9H0D6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.141e-7■■■□□ 17.2
XRN2Q9H0D6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.11e-7■■■□□ 17.2
XRN2Q9H0D6 RENBP-204ENST00000442361 817 ntTSL 321.84■■□□□ 1.091e-7■■■□□ 17.2
XRN2Q9H0D6 KLHL24-208ENST00000468101 574 ntTSL 421.44■■□□□ 1.022e-6■■■□□ 17.2
XRN2Q9H0D6 RENBP-207ENST00000462086 609 ntTSL 221.34■■□□□ 1.011e-7■■■□□ 17.2
XRN2Q9H0D6 TALDO1-202ENST00000528070 856 ntTSL 521.2■□□□□ 0.981e-7■■■□□ 17.2
XRN2Q9H0D6 TALDO1-208ENST00000532685 568 ntTSL 221.18■□□□□ 0.981e-7■■■□□ 17.2
XRN2Q9H0D6 LMAN2-204ENST00000504071 562 ntTSL 220.94■□□□□ 0.945e-12■■■□□ 17.2
XRN2Q9H0D6 ATP2A3-212ENST00000572694 894 ntTSL 220.64■□□□□ 0.891e-7■■■□□ 17.2
XRN2Q9H0D6 TFG-207ENST00000487505 913 ntTSL 320.51■□□□□ 0.871e-7■■■□□ 17.2
XRN2Q9H0D6 TFG-203ENST00000463568 723 ntTSL 320.22■□□□□ 0.831e-7■■■□□ 17.2
XRN2Q9H0D6 LSM4-206ENST00000600289 1113 ntTSL 218.93■□□□□ 0.621e-7■■■□□ 17.2
XRN2Q9H0D6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.611e-7■■■□□ 17.2
XRN2Q9H0D6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.591e-7■■■□□ 17.2
XRN2Q9H0D6 KLHL24-210ENST00000475827 545 ntTSL 418.64■□□□□ 0.572e-6■■■□□ 17.2
XRN2Q9H0D6 SF1-208ENST00000432725 475 ntTSL 418.42■□□□□ 0.541e-7■■■□□ 17.2
XRN2Q9H0D6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.491e-7■■■□□ 17.2
XRN2Q9H0D6 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.38■□□□□ 0.371e-7■■■□□ 17.2
XRN2Q9H0D6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.312e-6■■■□□ 17.2
XRN2Q9H0D6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.231e-7■■■□□ 17.2
XRN2Q9H0D6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.229e-14■■■□□ 17.2
XRN2Q9H0D6 UVSSA-203ENST00000503548 4819 ntTSL 216.36■□□□□ 0.211e-7■■■□□ 17.2
XRN2Q9H0D6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.149e-14■■■□□ 17.2
XRN2Q9H0D6 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.071e-7■■■□□ 17.2
XRN2Q9H0D6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.011e-7■■■□□ 17.2
XRN2Q9H0D6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.061e-7■■■□□ 17.2
XRN2Q9H0D6 TALDO1-204ENST00000530119 1191 ntTSL 214.43□□□□□ -0.11e-7■■■□□ 17.2
XRN2Q9H0D6 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.131e-7■■■□□ 17.2
XRN2Q9H0D6 TALDO1-205ENST00000530440 710 ntTSL 314.03□□□□□ -0.161e-7■■■□□ 17.2
XRN2Q9H0D6 SFSWAP-209ENST00000540469 3536 ntTSL 312.12□□□□□ -0.471e-7■■■□□ 17.2
XRN2Q9H0D6 GAK-204ENST00000504435 4346 ntTSL 211.64□□□□□ -0.556e-13■■■□□ 17.2
XRN2Q9H0D6 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.71e-7■■■□□ 17.2
XRN2Q9H0D6 KLHL24-205ENST00000454652 7380 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.72e-6■■■□□ 17.2
XRN2Q9H0D6 PINK1-203ENST00000492302 3821 ntTSL 27.51□□□□□ -1.211e-7■■■□□ 17.2
XRN2Q9H0D6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.421e-7■■■□□ 17.2
XRN2Q9H0D6 BACH1-210ENST00000547141 315 ntTSL 25.77□□□□□ -1.491e-7■■■□□ 17.2
XRN2Q9H0D6 BACH1-213ENST00000550131 349 ntTSL 23.93□□□□□ -1.781e-7■■■□□ 17.2
XRN2Q9H0D6 BACH1-209ENST00000546469 485 ntTSL 33.6□□□□□ -1.831e-7■■■□□ 17.2
XRN2Q9H0D6 BACH1-211ENST00000548219 325 ntTSL 22.62□□□□□ -1.991e-7■■■□□ 17.2
XRN2Q9H0D6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.421e-6■■■□□ 17.2
XRN2Q9H0D6 SLC26A11-217ENST00000577155 762 ntTSL 526.07■■□□□ 1.768e-8■■■□□ 17.2
XRN2Q9H0D6 SLC26A11-208ENST00000571602 766 ntTSL 320.51■□□□□ 0.878e-8■■■□□ 17.2
XRN2Q9H0D6 SLC26A11-211ENST00000572652 1519 ntTSL 219.71■□□□□ 0.758e-8■■■□□ 17.2
XRN2Q9H0D6 SLC26A11-214ENST00000574967 547 ntTSL 418.5■□□□□ 0.558e-8■■■□□ 17.2
XRN2Q9H0D6 SLC26A11-213ENST00000573809 523 ntTSL 414.2□□□□□ -0.148e-8■■■□□ 17.2
XRN2Q9H0D6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.5■□□□□ 0.553e-6■■■□□ 17.2
XRN2Q9H0D6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.25■□□□□ 0.353e-6■■■□□ 17.2
XRN2Q9H0D6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.1■□□□□ 0.333e-6■■■□□ 17.2
XRN2Q9H0D6 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.463e-6■■■□□ 17.2
XRN2Q9H0D6 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC12.03□□□□□ -0.483e-6■■■□□ 17.2
XRN2Q9H0D6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.3■■□□□ 13e-6■■■□□ 17.2
XRN2Q9H0D6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.183e-6■■■□□ 17.2
XRN2Q9H0D6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.023e-7■■■□□ 17.1
XRN2Q9H0D6 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.373e-7■■■□□ 17.1
XRN2Q9H0D6 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.453e-7■■■□□ 17.1
XRN2Q9H0D6 ZNF219-205ENST00000553980 576 ntTSL 423.4■■□□□ 1.341e-6■■■□□ 17.1
XRN2Q9H0D6 ZNF219-206ENST00000554478 545 ntTSL 419.21■□□□□ 0.671e-6■■■□□ 17.1
XRN2Q9H0D6 ZNF219-211ENST00000556174 546 ntTSL 418.59■□□□□ 0.571e-6■■■□□ 17.1
XRN2Q9H0D6 ZNF219-212ENST00000556944 609 ntTSL 417.48■□□□□ 0.391e-6■■■□□ 17.1
XRN2Q9H0D6 ZNF219-209ENST00000555697 654 ntTSL 214.4□□□□□ -0.11e-6■■■□□ 17.1
XRN2Q9H0D6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.422e-6■■■□□ 17.1
XRN2Q9H0D6 GAPDH-208ENST00000474249 1333 ntTSL 516.44■□□□□ 0.222e-6■■■□□ 17.1
XRN2Q9H0D6 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.12e-6■■■□□ 17.1
XRN2Q9H0D6 GAPDH-206ENST00000466525 1720 ntTSL 515.12■□□□□ 0.012e-6■■■□□ 17.1
XRN2Q9H0D6 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.022e-6■■■□□ 17.1
XRN2Q9H0D6 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC14.58□□□□□ -0.082e-6■■■□□ 17.1
XRN2Q9H0D6 GAPDH-207ENST00000466588 1363 ntTSL 513.38□□□□□ -0.272e-6■■■□□ 17.1
XRN2Q9H0D6 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)15.6■□□□□ 0.096e-12■■■□□ 17.1
XRN2Q9H0D6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.748e-7■■■□□ 17.1
XRN2Q9H0D6 EXOC3L4-207ENST00000560925 2341 ntTSL 224.04■■□□□ 1.448e-7■■■□□ 17.1
XRN2Q9H0D6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.36■■■□□ 2.132e-7■■■□□ 17.1
XRN2Q9H0D6 H2AFY-211ENST00000507868 861 ntTSL 228.36■■■□□ 2.132e-7■■■□□ 17.1
XRN2Q9H0D6 MGAT1-213ENST00000506889 1104 ntTSL 227.48■■□□□ 1.998e-7■■■□□ 17.1
XRN2Q9H0D6 MIR4466-201ENST00000606121 54 ntBASIC27.17■■□□□ 1.949e-10■■■□□ 17.1
XRN2Q9H0D6 AKT1-217ENST00000557494 408 ntTSL 226.14■■□□□ 1.789e-10■■■□□ 17.1
XRN2Q9H0D6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.89■■□□□ 1.589e-10■■■□□ 17.1
XRN2Q9H0D6 PIP5K1A-206ENST00000424999 567 ntTSL 424.45■■□□□ 1.59e-10■■■□□ 17.1
XRN2Q9H0D6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.491e-9■■■□□ 17.1
XRN2Q9H0D6 MGAT1-224ENST00000514438 607 ntTSL 423.91■■□□□ 1.428e-7■■■□□ 17.1
XRN2Q9H0D6 MGAT1-223ENST00000514283 619 ntTSL 223.91■■□□□ 1.428e-7■■■□□ 17.1
XRN2Q9H0D6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.48■■□□□ 1.357e-8■■■□□ 17.1
XRN2Q9H0D6 PIP5K1A-209ENST00000454769 540 ntTSL 423.14■■□□□ 1.299e-10■■■□□ 17.1
XRN2Q9H0D6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.18e-7■■■□□ 17.1
XRN2Q9H0D6 MGAT1-222ENST00000513431 555 ntTSL 221.79■■□□□ 1.088e-7■■■□□ 17.1
XRN2Q9H0D6 MGAT1-206ENST00000502678 693 ntTSL 421.06■□□□□ 0.968e-7■■■□□ 17.1
XRN2Q9H0D6 H2AFY-210ENST00000506671 1905 ntTSL 520.75■□□□□ 0.912e-7■■■□□ 17.1
XRN2Q9H0D6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.862e-7■■■□□ 17.1
XRN2Q9H0D6 MGAT1-220ENST00000512695 549 ntTSL 419.2■□□□□ 0.668e-7■■■□□ 17.1
XRN2Q9H0D6 PSME2-203ENST00000558273 1502 ntTSL 218.95■□□□□ 0.629e-10■■■□□ 17.1
Retrieved 100 of 21,068 protein–RNA pairs in 237.2 ms