Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.44■□□□□ 0.54
CLPBQ9H078 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 SPDYE13P-201ENST00000445314 798 ntBASIC18.44■□□□□ 0.54
CLPBQ9H078 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 AC024243.1-201ENST00000609234 778 ntBASIC18.44■□□□□ 0.54
CLPBQ9H078 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.44■□□□□ 0.54
CLPBQ9H078 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.44■□□□□ 0.54
CLPBQ9H078 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.44■□□□□ 0.54
CLPBQ9H078 AC126763.1-201ENST00000552015 2118 ntBASIC18.44■□□□□ 0.54
CLPBQ9H078 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CLPBQ9H078 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.44■□□□□ 0.54
CLPBQ9H078 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.44■□□□□ 0.54
CLPBQ9H078 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.44■□□□□ 0.54
CLPBQ9H078 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPBQ9H078 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CLPBQ9H078 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLPBQ9H078 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.43■□□□□ 0.54
CLPBQ9H078 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.43■□□□□ 0.54
CLPBQ9H078 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.43■□□□□ 0.54
CLPBQ9H078 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLPBQ9H078 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.43■□□□□ 0.54
CLPBQ9H078 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.43■□□□□ 0.54
CLPBQ9H078 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.43■□□□□ 0.54
CLPBQ9H078 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.43■□□□□ 0.54
CLPBQ9H078 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.43■□□□□ 0.54
CLPBQ9H078 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.43■□□□□ 0.54
CLPBQ9H078 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.43■□□□□ 0.54
CLPBQ9H078 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.43■□□□□ 0.54
CLPBQ9H078 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 AC090164.3-201ENST00000610780 2143 ntBASIC18.43■□□□□ 0.54
CLPBQ9H078 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPBQ9H078 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLPBQ9H078 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CLPBQ9H078 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 RASA4DP-201ENST00000460726 1199 ntBASIC18.42■□□□□ 0.54
CLPBQ9H078 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPBQ9H078 KRT18P41-201ENST00000518924 1277 ntBASIC18.42■□□□□ 0.54
CLPBQ9H078 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.42■□□□□ 0.54
CLPBQ9H078 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.42■□□□□ 0.54
CLPBQ9H078 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
CLPBQ9H078 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.42■□□□□ 0.54
CLPBQ9H078 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
CLPBQ9H078 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLPBQ9H078 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
CLPBQ9H078 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.42■□□□□ 0.54
CLPBQ9H078 AC093458.2-201ENST00000623150 629 ntBASIC18.42■□□□□ 0.54
CLPBQ9H078 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPBQ9H078 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPBQ9H078 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.42■□□□□ 0.54
CLPBQ9H078 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.42■□□□□ 0.54
CLPBQ9H078 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
CLPBQ9H078 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPBQ9H078 AC073592.3-201ENST00000625118 1834 ntBASIC18.42■□□□□ 0.54
CLPBQ9H078 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms