Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LRRC3Q9BY71 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3Q9BY71 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3Q9BY71 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3Q9BY71 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3Q9BY71 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC3Q9BY71 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC3Q9BY71 MYLKP1-201ENST00000509077 1580 ntBASIC19.1■□□□□ 0.65
LRRC3Q9BY71 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.1■□□□□ 0.65
LRRC3Q9BY71 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 AP000347.1-202ENST00000435868 847 ntBASIC19.1■□□□□ 0.65
LRRC3Q9BY71 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 LINC01711-201ENST00000598340 967 ntBASIC19.1■□□□□ 0.65
LRRC3Q9BY71 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.1■□□□□ 0.65
LRRC3Q9BY71 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3Q9BY71 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 AL024508.2-201ENST00000607749 1894 ntBASIC19.09■□□□□ 0.65
LRRC3Q9BY71 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 AC106795.1-205ENST00000512851 1056 ntBASIC19.09■□□□□ 0.65
LRRC3Q9BY71 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 AP002469.2-201ENST00000531724 424 ntBASIC19.09■□□□□ 0.65
LRRC3Q9BY71 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 AC011840.4-201ENST00000578471 627 ntBASIC19.09■□□□□ 0.65
LRRC3Q9BY71 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 AC099343.3-201ENST00000605834 2503 ntBASIC19.09■□□□□ 0.65
LRRC3Q9BY71 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC3Q9BY71 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC3Q9BY71 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC3Q9BY71 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC3Q9BY71 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC3Q9BY71 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC3Q9BY71 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC3Q9BY71 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC3Q9BY71 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC3Q9BY71 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRC3Q9BY71 VENTXP7-201ENST00000475503 772 ntBASIC19.08■□□□□ 0.64
LRRC3Q9BY71 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC3Q9BY71 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRC3Q9BY71 SLC25A6P4-201ENST00000586535 553 ntBASIC19.08■□□□□ 0.64
LRRC3Q9BY71 BNIP3P18-201ENST00000593976 575 ntBASIC19.08■□□□□ 0.64
LRRC3Q9BY71 AL121912.1-201ENST00000603683 238 ntBASIC19.08■□□□□ 0.64
LRRC3Q9BY71 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.08■□□□□ 0.64
LRRC3Q9BY71 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.08■□□□□ 0.64
LRRC3Q9BY71 AP000974.1-201ENST00000623909 2387 ntBASIC19.08■□□□□ 0.64
LRRC3Q9BY71 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC3Q9BY71 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LRRC3Q9BY71 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC3Q9BY71 AC112777.1-201ENST00000540175 1423 ntBASIC19.08■□□□□ 0.64
LRRC3Q9BY71 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
LRRC3Q9BY71 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC3Q9BY71 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC3Q9BY71 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC3Q9BY71 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC3Q9BY71 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms