Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC108073.2-201ENST00000464002 357 ntBASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 AC004877.2-201ENST00000623941 599 ntBASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 AC113404.2-201ENST00000507884 177 ntBASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN3Q9BTN0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 AC079776.2-201ENST00000641154 1609 ntBASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 MTCL1P1-201ENST00000446207 792 ntBASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 CRB3P1-201ENST00000449338 276 ntBASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN3Q9BTN0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRFN3Q9BTN0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
LRFN3Q9BTN0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 AC022145.2-201ENST00000598203 171 ntBASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 AC091812.2-201ENST00000619081 385 ntBASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 BCAR1-209ENST00000546196 1340 ntBASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.2■□□□□ 0.5
LRFN3Q9BTN0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms