Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF11Q99590 Z98044.1-201ENST00000632503 1764 ntBASIC26.25■■□□□ 1.79
SCAF11Q99590 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
SCAF11Q99590 AC004832.2-201ENST00000426397 482 ntBASIC26.25■■□□□ 1.79
SCAF11Q99590 AC113404.2-201ENST00000507884 177 ntBASIC26.25■■□□□ 1.79
SCAF11Q99590 RNA5SP415-201ENST00000517246 115 ntBASIC26.25■■□□□ 1.79
SCAF11Q99590 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC26.25■■□□□ 1.79
SCAF11Q99590 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC26.25■■□□□ 1.79
SCAF11Q99590 AC025062.2-201ENST00000605477 670 ntBASIC26.25■■□□□ 1.79
SCAF11Q99590 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC26.25■■□□□ 1.79
SCAF11Q99590 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF11Q99590 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC26.25■■□□□ 1.79
SCAF11Q99590 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF11Q99590 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF11Q99590 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF11Q99590 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF11Q99590 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF11Q99590 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF11Q99590 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF11Q99590 HS6ST1P1-201ENST00000481504 1234 ntBASIC26.24■■□□□ 1.79
SCAF11Q99590 AC112482.1-201ENST00000492080 688 ntBASIC26.24■■□□□ 1.79
SCAF11Q99590 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC26.24■■□□□ 1.79
SCAF11Q99590 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
SCAF11Q99590 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC26.24■■□□□ 1.79
SCAF11Q99590 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC26.24■■□□□ 1.79
SCAF11Q99590 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF11Q99590 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC26.24■■□□□ 1.79
SCAF11Q99590 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF11Q99590 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC26.24■■□□□ 1.79
SCAF11Q99590 NFYC-AS1-201ENST00000606277 1687 ntBASIC26.24■■□□□ 1.79
SCAF11Q99590 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC26.24■■□□□ 1.79
SCAF11Q99590 AL357033.4-201ENST00000617703 1807 ntBASIC26.24■■□□□ 1.79
SCAF11Q99590 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SCAF11Q99590 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SCAF11Q99590 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC26.24■■□□□ 1.79
SCAF11Q99590 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
SCAF11Q99590 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF11Q99590 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SCAF11Q99590 RBSN-204ENST00000449050 903 ntTSL 2 BASIC26.23■■□□□ 1.79
SCAF11Q99590 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC26.23■■□□□ 1.79
SCAF11Q99590 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC26.23■■□□□ 1.79
SCAF11Q99590 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC26.23■■□□□ 1.79
SCAF11Q99590 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF11Q99590 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC26.23■■□□□ 1.79
SCAF11Q99590 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC26.23■■□□□ 1.79
SCAF11Q99590 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC26.23■■□□□ 1.79
SCAF11Q99590 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF11Q99590 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF11Q99590 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC26.23■■□□□ 1.79
SCAF11Q99590 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF11Q99590 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC26.23■■□□□ 1.79
SCAF11Q99590 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC26.23■■□□□ 1.79
SCAF11Q99590 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SCAF11Q99590 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC26.23■■□□□ 1.79
SCAF11Q99590 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF11Q99590 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC26.23■■□□□ 1.79
SCAF11Q99590 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC26.23■■□□□ 1.79
SCAF11Q99590 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF11Q99590 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF11Q99590 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF11Q99590 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC26.23■■□□□ 1.79
SCAF11Q99590 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
SCAF11Q99590 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF11Q99590 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC26.23■■□□□ 1.79
SCAF11Q99590 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF11Q99590 DNAJB3-202ENST00000449667 1266 ntBASIC26.23■■□□□ 1.79
SCAF11Q99590 AL138831.2-201ENST00000606564 490 ntBASIC26.23■■□□□ 1.79
SCAF11Q99590 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC26.23■■□□□ 1.79
SCAF11Q99590 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF11Q99590 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF11Q99590 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF11Q99590 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF11Q99590 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF11Q99590 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF11Q99590 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC26.22■■□□□ 1.79
SCAF11Q99590 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF11Q99590 KRT18P41-201ENST00000518924 1277 ntBASIC26.22■■□□□ 1.79
SCAF11Q99590 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF11Q99590 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC26.22■■□□□ 1.79
SCAF11Q99590 AC008735.5-201ENST00000623544 497 ntBASIC26.22■■□□□ 1.79
SCAF11Q99590 AC079781.4-201ENST00000641908 219 ntBASIC26.22■■□□□ 1.79
SCAF11Q99590 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC26.21■■□□□ 1.79
SCAF11Q99590 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 AC116562.4-201ENST00000641316 2276 ntBASIC26.21■■□□□ 1.79
SCAF11Q99590 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 AP005117.1-201ENST00000584346 1413 ntBASIC26.21■■□□□ 1.79
SCAF11Q99590 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
SCAF11Q99590 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC26.21■■□□□ 1.79
SCAF11Q99590 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC26.21■■□□□ 1.79
SCAF11Q99590 OR7E14P-202ENST00000530490 1290 ntBASIC26.21■■□□□ 1.79
SCAF11Q99590 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC26.21■■□□□ 1.79
SCAF11Q99590 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms