Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 HEIH-201ENST00000623091 1652 ntBASIC17.29■□□□□ 0.36
NR1H4Q96RI1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.29■□□□□ 0.36
NR1H4Q96RI1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 AC023632.3-201ENST00000521633 145 ntBASIC17.28■□□□□ 0.36
NR1H4Q96RI1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H4Q96RI1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 KRT19P1-201ENST00000405746 1186 ntBASIC17.27■□□□□ 0.36
NR1H4Q96RI1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms