Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 NOC2LP1-202ENST00000452600 2235 ntBASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MS4A4EQ96PG1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 AC099343.3-201ENST00000605834 2503 ntBASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 SEC1P-202ENST00000473944 940 ntBASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MS4A4EQ96PG1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 AC024243.1-201ENST00000609234 778 ntBASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A4EQ96PG1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A4EQ96PG1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms