Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 BICD1-207ENST00000551848 1962 ntBASIC13.87□□□□□ -0.19
AP1S3Q96PC3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 AC005829.2-201ENST00000571422 1056 ntBASIC13.87□□□□□ -0.19
AP1S3Q96PC3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 AC005181.1-201ENST00000604782 1256 ntBASIC13.87□□□□□ -0.19
AP1S3Q96PC3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 AC083906.6-201ENST00000641366 219 ntBASIC13.87□□□□□ -0.19
AP1S3Q96PC3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S3Q96PC3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 KRT18P5-201ENST00000436075 1291 ntBASIC13.86□□□□□ -0.19
AP1S3Q96PC3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 ANO7L1-203ENST00000602586 1720 ntBASIC13.86□□□□□ -0.19
AP1S3Q96PC3 AL354751.1-201ENST00000412768 1863 ntBASIC13.86□□□□□ -0.19
AP1S3Q96PC3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 AC084018.2-201ENST00000613093 2607 ntBASIC13.86□□□□□ -0.19
AP1S3Q96PC3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S3Q96PC3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S3Q96PC3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms