Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 MIR574-201ENST00000385209 96 ntBASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 AC139530.3-201ENST00000620344 690 ntBASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 BX323043.1-201ENST00000641006 1765 ntBASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 NUS1P2-201ENST00000417358 873 ntBASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 POM121L3P-201ENST00000419331 1163 ntBASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 MINOS1P3-201ENST00000457048 203 ntBASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 RNA5SP419-201ENST00000515908 135 ntBASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 AC011840.4-201ENST00000578471 627 ntBASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 AP005901.3-202ENST00000581653 237 ntBASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC46A1Q96NT5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC46A1Q96NT5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC46A1Q96NT5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC46A1Q96NT5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC46A1Q96NT5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC46A1Q96NT5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC46A1Q96NT5 AL353692.3-201ENST00000407031 1396 ntBASIC17.52■□□□□ 0.39
SLC46A1Q96NT5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SLC46A1Q96NT5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SLC46A1Q96NT5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 IL9RP2-201ENST00000423948 1312 ntBASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 KRT89P-201ENST00000620027 1478 ntBASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 AL773604.1-201ENST00000617417 272 ntBASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC46A1Q96NT5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms