Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.78■■□□□ 1.08
DDX11Q96FC9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
DDX11Q96FC9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.78■■□□□ 1.08
DDX11Q96FC9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.78■■□□□ 1.08
DDX11Q96FC9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.78■■□□□ 1.08
DDX11Q96FC9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.78■■□□□ 1.08
DDX11Q96FC9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
DDX11Q96FC9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
DDX11Q96FC9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.78■■□□□ 1.08
DDX11Q96FC9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX11Q96FC9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX11Q96FC9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX11Q96FC9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
DDX11Q96FC9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
DDX11Q96FC9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.77■■□□□ 1.08
DDX11Q96FC9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX11Q96FC9 GPAT2P1-201ENST00000444924 1672 ntBASIC21.77■■□□□ 1.08
DDX11Q96FC9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.77■■□□□ 1.08
DDX11Q96FC9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX11Q96FC9 KRT18P56-201ENST00000507275 550 ntBASIC21.77■■□□□ 1.08
DDX11Q96FC9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.77■■□□□ 1.08
DDX11Q96FC9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.77■■□□□ 1.08
DDX11Q96FC9 AL390961.4-201ENST00000623958 2535 ntBASIC21.77■■□□□ 1.08
DDX11Q96FC9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
DDX11Q96FC9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX11Q96FC9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
DDX11Q96FC9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 AC073592.3-201ENST00000625118 1834 ntBASIC21.76■■□□□ 1.07
DDX11Q96FC9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 BICD1-207ENST00000551848 1962 ntBASIC21.76■■□□□ 1.07
DDX11Q96FC9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 AC112907.2-201ENST00000448639 330 ntBASIC21.76■■□□□ 1.07
DDX11Q96FC9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 GCSHP2-201ENST00000560971 527 ntBASIC21.76■■□□□ 1.07
DDX11Q96FC9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 AC093458.2-201ENST00000623150 629 ntBASIC21.76■■□□□ 1.07
DDX11Q96FC9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 AC005332.1-201ENST00000577698 1310 ntBASIC21.76■■□□□ 1.07
DDX11Q96FC9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX11Q96FC9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX11Q96FC9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DDX11Q96FC9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
DDX11Q96FC9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.75■■□□□ 1.07
DDX11Q96FC9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.75■■□□□ 1.07
DDX11Q96FC9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
DDX11Q96FC9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms