Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 AL353692.3-201ENST00000407031 1396 ntBASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 BX276092.5-203ENST00000456199 560 ntBASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 AC004263.2-201ENST00000617183 678 ntBASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC3Q96DC8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 ATP5G2P1-201ENST00000433580 426 ntBASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 TSSC2-201ENST00000450217 709 ntBASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 NPAP1P7-201ENST00000613027 823 ntBASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.29■□□□□ 0.52
ECHDC3Q96DC8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 AC090164.3-201ENST00000610780 2143 ntBASIC18.28■□□□□ 0.52
ECHDC3Q96DC8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms