Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.25■□□□□ 0.19
APH1AQ96BI3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.25■□□□□ 0.19
APH1AQ96BI3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.25■□□□□ 0.19
APH1AQ96BI3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APH1AQ96BI3 AC126763.1-201ENST00000552015 2118 ntBASIC16.25■□□□□ 0.19
APH1AQ96BI3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APH1AQ96BI3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
APH1AQ96BI3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 HLA-F-220ENST00000434407 884 ntBASIC16.24■□□□□ 0.19
APH1AQ96BI3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.24■□□□□ 0.19
APH1AQ96BI3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APH1AQ96BI3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 AC004408.2-201ENST00000623613 2777 ntBASIC16.23■□□□□ 0.19
APH1AQ96BI3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 AL136038.3-201ENST00000561909 1096 ntBASIC16.23■□□□□ 0.19
APH1AQ96BI3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 AC008687.5-201ENST00000593746 558 ntBASIC16.23■□□□□ 0.19
APH1AQ96BI3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.23■□□□□ 0.19
APH1AQ96BI3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
APH1AQ96BI3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 AC005082.1-201ENST00000413042 2259 ntBASIC16.22■□□□□ 0.19
APH1AQ96BI3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 AC099343.3-201ENST00000605834 2503 ntBASIC16.22■□□□□ 0.19
APH1AQ96BI3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.22■□□□□ 0.19
APH1AQ96BI3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.22■□□□□ 0.19
APH1AQ96BI3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.22■□□□□ 0.19
APH1AQ96BI3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
APH1AQ96BI3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
APH1AQ96BI3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 SDHAP2-201ENST00000455183 2001 ntBASIC16.22■□□□□ 0.19
APH1AQ96BI3 WIZP1-201ENST00000531444 2299 ntBASIC16.22■□□□□ 0.19
APH1AQ96BI3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
APH1AQ96BI3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.22■□□□□ 0.19
APH1AQ96BI3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
APH1AQ96BI3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.22■□□□□ 0.19
APH1AQ96BI3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms