Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX21Q969T3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX21Q969T3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX21Q969T3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX21Q969T3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX21Q969T3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
SNX21Q969T3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SNX21Q969T3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 AC036111.1-201ENST00000533973 1582 ntBASIC21.75■■□□□ 1.07
SNX21Q969T3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.75■■□□□ 1.07
SNX21Q969T3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SNX21Q969T3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 MESTP1-201ENST00000404287 994 ntBASIC21.75■■□□□ 1.07
SNX21Q969T3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SNX21Q969T3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.75■■□□□ 1.07
SNX21Q969T3 MIR6786-201ENST00000616843 113 ntBASIC21.75■■□□□ 1.07
SNX21Q969T3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SNX21Q969T3 CR392000.1-201ENST00000624770 1228 ntBASIC21.75■■□□□ 1.07
SNX21Q969T3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.75■■□□□ 1.07
SNX21Q969T3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX21Q969T3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX21Q969T3 AD000864.1-201ENST00000624076 2295 ntBASIC21.75■■□□□ 1.07
SNX21Q969T3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX21Q969T3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
SNX21Q969T3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.74■■□□□ 1.07
SNX21Q969T3 AP001094.4-201ENST00000579008 2176 ntBASIC21.74■■□□□ 1.07
SNX21Q969T3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX21Q969T3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX21Q969T3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX21Q969T3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX21Q969T3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX21Q969T3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX21Q969T3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SNX21Q969T3 AL353807.1-201ENST00000427475 662 ntBASIC21.74■■□□□ 1.07
SNX21Q969T3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SNX21Q969T3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SNX21Q969T3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.74■■□□□ 1.07
SNX21Q969T3 LINC00602-201ENST00000629776 2065 ntBASIC21.74■■□□□ 1.07
SNX21Q969T3 AC099343.3-201ENST00000605834 2503 ntBASIC21.74■■□□□ 1.07
SNX21Q969T3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX21Q969T3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX21Q969T3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.74■■□□□ 1.07
SNX21Q969T3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX21Q969T3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.74■■□□□ 1.07
SNX21Q969T3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX21Q969T3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SNX21Q969T3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX21Q969T3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX21Q969T3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX21Q969T3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX21Q969T3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX21Q969T3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX21Q969T3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
SNX21Q969T3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX21Q969T3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX21Q969T3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX21Q969T3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.73■■□□□ 1.07
SNX21Q969T3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SNX21Q969T3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX21Q969T3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX21Q969T3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SNX21Q969T3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX21Q969T3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX21Q969T3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SNX21Q969T3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX21Q969T3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SNX21Q969T3 LINC01126-201ENST00000623515 1646 ntBASIC21.73■■□□□ 1.07
SNX21Q969T3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX21Q969T3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX21Q969T3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SNX21Q969T3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SNX21Q969T3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
SNX21Q969T3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.72■■□□□ 1.07
SNX21Q969T3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX21Q969T3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX21Q969T3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.72■■□□□ 1.07
SNX21Q969T3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX21Q969T3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX21Q969T3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SNX21Q969T3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX21Q969T3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SNX21Q969T3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX21Q969T3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX21Q969T3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX21Q969T3 AC096733.2-201ENST00000609937 1394 ntBASIC21.72■■□□□ 1.07
SNX21Q969T3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX21Q969T3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX21Q969T3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX21Q969T3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX21Q969T3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms