Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 KRT8P32-201ENST00000512863 1461 ntBASIC18.8■□□□□ 0.6
SCG3Q8WXD2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 AL353719.1-201ENST00000566847 864 ntBASIC18.8■□□□□ 0.6
SCG3Q8WXD2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 NTF6B-201ENST00000591913 560 ntBASIC18.8■□□□□ 0.6
SCG3Q8WXD2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 AC092338.2-201ENST00000568827 1415 ntBASIC18.8■□□□□ 0.6
SCG3Q8WXD2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 AC106820.2-201ENST00000563775 3264 ntBASIC18.8■□□□□ 0.6
SCG3Q8WXD2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCG3Q8WXD2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 AC139713.2-201ENST00000641328 2723 ntBASIC18.79■□□□□ 0.6
SCG3Q8WXD2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 AC068587.9-201ENST00000641814 219 ntBASIC18.79■□□□□ 0.6
SCG3Q8WXD2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 AL354751.1-201ENST00000412768 1863 ntBASIC18.79■□□□□ 0.6
SCG3Q8WXD2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 BICD1-207ENST00000551848 1962 ntBASIC18.79■□□□□ 0.6
SCG3Q8WXD2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCG3Q8WXD2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 AL023803.3-201ENST00000615559 522 ntBASIC18.78■□□□□ 0.6
SCG3Q8WXD2 AC006011.2-201ENST00000621313 1158 ntBASIC18.78■□□□□ 0.6
SCG3Q8WXD2 AL031432.5-201ENST00000641059 760 ntBASIC18.78■□□□□ 0.6
SCG3Q8WXD2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCG3Q8WXD2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCG3Q8WXD2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SCG3Q8WXD2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.77■□□□□ 0.6
SCG3Q8WXD2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms