Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 EMD-201ENST00000369835 966 ntTSL 3 BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 TSPY12P-201ENST00000421279 868 ntBASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SH3TC1Q8TE82 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SH3TC1Q8TE82 AC018445.3-201ENST00000624177 1945 ntBASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 AL022342.1-201ENST00000400363 863 ntBASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 AC096582.2-201ENST00000510860 516 ntBASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 AC114341.1-201ENST00000618070 349 ntBASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.8■■□□□ 1.24
SH3TC1Q8TE82 AL499627.1-201ENST00000569373 2188 ntBASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 MIR5100-201ENST00000579544 119 ntBASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 AC005336.2-201ENST00000593183 939 ntBASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 AL591684.3-201ENST00000605187 298 ntBASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 TP73-AS1-207ENST00000624167 988 ntBASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SH3TC1Q8TE82 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 HLA-A-201ENST00000376802 1334 ntBASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 AC068472.1-201ENST00000474589 881 ntBASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.78■■□□□ 1.24
SH3TC1Q8TE82 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.77■■□□□ 1.24
SH3TC1Q8TE82 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SH3TC1Q8TE82 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SH3TC1Q8TE82 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SH3TC1Q8TE82 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SH3TC1Q8TE82 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC22.77■■□□□ 1.24
SH3TC1Q8TE82 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms