Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RDH11Q8TC12 AL163051.1-201ENST00000569214 1512 ntBASIC18.07■□□□□ 0.48
RDH11Q8TC12 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RDH11Q8TC12 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RDH11Q8TC12 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RDH11Q8TC12 AC009102.3-201ENST00000623118 1491 ntBASIC18.07■□□□□ 0.48
RDH11Q8TC12 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RDH11Q8TC12 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RDH11Q8TC12 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 RPPH1-201ENST00000516869 333 ntBASIC18.06■□□□□ 0.48
RDH11Q8TC12 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 SDHAP2-201ENST00000455183 2001 ntBASIC18.06■□□□□ 0.48
RDH11Q8TC12 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.06■□□□□ 0.48
RDH11Q8TC12 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RDH11Q8TC12 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.05■□□□□ 0.48
RDH11Q8TC12 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RDH11Q8TC12 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RDH11Q8TC12 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 AC006116.8-202ENST00000587620 1550 ntBASIC18.04■□□□□ 0.48
RDH11Q8TC12 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 MFAP1P1-201ENST00000442257 1255 ntBASIC18.04■□□□□ 0.48
RDH11Q8TC12 GCSHP5-201ENST00000443090 522 ntBASIC18.04■□□□□ 0.48
RDH11Q8TC12 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 AL359736.2-201ENST00000621992 437 ntBASIC18.04■□□□□ 0.48
RDH11Q8TC12 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.04■□□□□ 0.48
RDH11Q8TC12 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RDH11Q8TC12 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms