Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 AC117947.1-201ENST00000427448 529 ntBASIC19.66■□□□□ 0.74
LMO3Q8TAP4 LIN28AP1-201ENST00000429574 405 ntBASIC19.66■□□□□ 0.74
LMO3Q8TAP4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 AC139887.4-201ENST00000607877 719 ntBASIC19.66■□□□□ 0.74
LMO3Q8TAP4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 BX664615.1-201ENST00000443558 458 ntBASIC19.65■□□□□ 0.74
LMO3Q8TAP4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 RASA4DP-201ENST00000460726 1199 ntBASIC19.65■□□□□ 0.74
LMO3Q8TAP4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 YBX1P2-201ENST00000489612 999 ntBASIC19.65■□□□□ 0.74
LMO3Q8TAP4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.65■□□□□ 0.74
LMO3Q8TAP4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.64■□□□□ 0.74
LMO3Q8TAP4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LMO3Q8TAP4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
LMO3Q8TAP4 AC067852.2-201ENST00000590513 2313 ntBASIC19.64■□□□□ 0.74
LMO3Q8TAP4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LMO3Q8TAP4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LMO3Q8TAP4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 ATP5G1P1-201ENST00000448724 379 ntBASIC19.64■□□□□ 0.73
LMO3Q8TAP4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 LINC01023-201ENST00000606054 436 ntBASIC19.64■□□□□ 0.73
LMO3Q8TAP4 AC006011.2-201ENST00000621313 1158 ntBASIC19.64■□□□□ 0.73
LMO3Q8TAP4 AL031432.5-201ENST00000641059 760 ntBASIC19.64■□□□□ 0.73
LMO3Q8TAP4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 AC132938.6-201ENST00000623828 1655 ntBASIC19.64■□□□□ 0.73
LMO3Q8TAP4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.64■□□□□ 0.73
LMO3Q8TAP4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.63■□□□□ 0.73
LMO3Q8TAP4 SPDYE15P-201ENST00000424157 909 ntBASIC19.63■□□□□ 0.73
LMO3Q8TAP4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms