Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.24□□□□□ -0.13
LINC01006Q8NI28 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.24□□□□□ -0.13
LINC01006Q8NI28 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 AC009533.2-201ENST00000543664 586 ntBASIC14.24□□□□□ -0.13
LINC01006Q8NI28 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 AC009154.2-201ENST00000621177 724 ntBASIC14.24□□□□□ -0.13
LINC01006Q8NI28 AL355877.3-201ENST00000622820 899 ntBASIC14.24□□□□□ -0.13
LINC01006Q8NI28 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 AL024508.2-201ENST00000607749 1894 ntBASIC14.24□□□□□ -0.13
LINC01006Q8NI28 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01006Q8NI28 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 RBM17P3-201ENST00000417687 1192 ntBASIC14.23□□□□□ -0.13
LINC01006Q8NI28 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 AC018712.1-201ENST00000455767 687 ntBASIC14.23□□□□□ -0.13
LINC01006Q8NI28 RNPS1P1-201ENST00000507437 918 ntBASIC14.23□□□□□ -0.13
LINC01006Q8NI28 AC073648.2-201ENST00000510116 352 ntBASIC14.23□□□□□ -0.13
LINC01006Q8NI28 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 SLC25A1P1-201ENST00000528351 927 ntBASIC14.23□□□□□ -0.13
LINC01006Q8NI28 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01006Q8NI28 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms