Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 AC023274.1-201ENST00000418278 595 ntBASIC25.34■■□□□ 1.65
XRN1Q8IZH2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC25.34■■□□□ 1.65
XRN1Q8IZH2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 AC108751.1-201ENST00000490852 363 ntBASIC25.34■■□□□ 1.65
XRN1Q8IZH2 AC112698.1-201ENST00000510299 916 ntBASIC25.34■■□□□ 1.65
XRN1Q8IZH2 RFPL4AP1-201ENST00000530883 850 ntBASIC25.34■■□□□ 1.65
XRN1Q8IZH2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 MIR3687-2-201ENST00000577708 61 ntBASIC25.34■■□□□ 1.65
XRN1Q8IZH2 MIR3687-1-201ENST00000614492 61 ntBASIC25.34■■□□□ 1.65
XRN1Q8IZH2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 AP000867.4-201ENST00000641616 219 ntBASIC25.34■■□□□ 1.65
XRN1Q8IZH2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC25.34■■□□□ 1.65
XRN1Q8IZH2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
XRN1Q8IZH2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
XRN1Q8IZH2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
XRN1Q8IZH2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
XRN1Q8IZH2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
XRN1Q8IZH2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC25.33■■□□□ 1.65
XRN1Q8IZH2 AC007967.3-201ENST00000434308 558 ntBASIC25.33■■□□□ 1.65
XRN1Q8IZH2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC25.33■■□□□ 1.65
XRN1Q8IZH2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
XRN1Q8IZH2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
XRN1Q8IZH2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC25.33■■□□□ 1.65
XRN1Q8IZH2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
XRN1Q8IZH2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
XRN1Q8IZH2 LINC01126-201ENST00000623515 1646 ntBASIC25.33■■□□□ 1.64
XRN1Q8IZH2 AC002310.6-201ENST00000624451 1377 ntBASIC25.32■■□□□ 1.64
XRN1Q8IZH2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC25.32■■□□□ 1.64
XRN1Q8IZH2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 MCCD1P2-201ENST00000423228 335 ntBASIC25.31■■□□□ 1.64
XRN1Q8IZH2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 CYMP-203ENST00000474680 1263 ntBASIC25.31■■□□□ 1.64
XRN1Q8IZH2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
XRN1Q8IZH2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 SIGLEC16-201ENST00000599858 1437 ntBASIC25.3■■□□□ 1.64
XRN1Q8IZH2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 LBH-203ENST00000404397 543 ntTSL 4 BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms