Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC56Q8IYG6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC56Q8IYG6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC56Q8IYG6 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC56Q8IYG6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LRRC56Q8IYG6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 HBZP1-201ENST00000354915 429 ntBASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 AC112907.2-201ENST00000448639 330 ntBASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LRRC56Q8IYG6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LRRC56Q8IYG6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 ABALON-201ENST00000629058 1903 ntBASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 SPDYE13P-201ENST00000445314 798 ntBASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC56Q8IYG6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms