Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 MIR3687-2-201ENST00000577708 61 ntBASIC22.27■■□□□ 1.16
SLX4Q8IY92 MIR3687-1-201ENST00000614492 61 ntBASIC22.27■■□□□ 1.16
SLX4Q8IY92 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLX4Q8IY92 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.27■■□□□ 1.16
SLX4Q8IY92 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SLX4Q8IY92 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
SLX4Q8IY92 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SLX4Q8IY92 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SLX4Q8IY92 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SLX4Q8IY92 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.15
SLX4Q8IY92 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
SLX4Q8IY92 METTL21AP1-201ENST00000438852 635 ntBASIC22.27■■□□□ 1.15
SLX4Q8IY92 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.27■■□□□ 1.15
SLX4Q8IY92 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.27■■□□□ 1.15
SLX4Q8IY92 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.27■■□□□ 1.15
SLX4Q8IY92 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.26■■□□□ 1.15
SLX4Q8IY92 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLX4Q8IY92 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SLX4Q8IY92 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.26■■□□□ 1.15
SLX4Q8IY92 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLX4Q8IY92 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLX4Q8IY92 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLX4Q8IY92 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLX4Q8IY92 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.26■■□□□ 1.15
SLX4Q8IY92 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.26■■□□□ 1.15
SLX4Q8IY92 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.26■■□□□ 1.15
SLX4Q8IY92 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SLX4Q8IY92 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC22.26■■□□□ 1.15
SLX4Q8IY92 AC008687.5-201ENST00000593746 558 ntBASIC22.26■■□□□ 1.15
SLX4Q8IY92 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.26■■□□□ 1.15
SLX4Q8IY92 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLX4Q8IY92 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLX4Q8IY92 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.26■■□□□ 1.15
SLX4Q8IY92 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLX4Q8IY92 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.25■■□□□ 1.15
SLX4Q8IY92 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.25■■□□□ 1.15
SLX4Q8IY92 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLX4Q8IY92 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.25■■□□□ 1.15
SLX4Q8IY92 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLX4Q8IY92 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLX4Q8IY92 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLX4Q8IY92 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.25■■□□□ 1.15
SLX4Q8IY92 KRT18P27-201ENST00000427733 1299 ntBASIC22.25■■□□□ 1.15
SLX4Q8IY92 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.25■■□□□ 1.15
SLX4Q8IY92 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.25■■□□□ 1.15
SLX4Q8IY92 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLX4Q8IY92 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
SLX4Q8IY92 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLX4Q8IY92 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.25■■□□□ 1.15
SLX4Q8IY92 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLX4Q8IY92 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SLX4Q8IY92 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLX4Q8IY92 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.25■■□□□ 1.15
SLX4Q8IY92 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLX4Q8IY92 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.25■■□□□ 1.15
SLX4Q8IY92 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLX4Q8IY92 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLX4Q8IY92 AP006288.1-201ENST00000446065 395 ntBASIC22.24■■□□□ 1.15
SLX4Q8IY92 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLX4Q8IY92 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SLX4Q8IY92 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.24■■□□□ 1.15
SLX4Q8IY92 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLX4Q8IY92 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.24■■□□□ 1.15
SLX4Q8IY92 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLX4Q8IY92 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.24■■□□□ 1.15
SLX4Q8IY92 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SLX4Q8IY92 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLX4Q8IY92 AC079776.2-201ENST00000641154 1609 ntBASIC22.24■■□□□ 1.15
SLX4Q8IY92 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.24■■□□□ 1.15
SLX4Q8IY92 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.24■■□□□ 1.15
SLX4Q8IY92 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLX4Q8IY92 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.24■■□□□ 1.15
SLX4Q8IY92 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLX4Q8IY92 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.24■■□□□ 1.15
SLX4Q8IY92 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.24■■□□□ 1.15
SLX4Q8IY92 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLX4Q8IY92 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SLX4Q8IY92 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLX4Q8IY92 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.23■■□□□ 1.15
SLX4Q8IY92 LINC01126-201ENST00000623515 1646 ntBASIC22.23■■□□□ 1.15
SLX4Q8IY92 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.23■■□□□ 1.15
SLX4Q8IY92 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SLX4Q8IY92 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.23■■□□□ 1.15
SLX4Q8IY92 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.23■■□□□ 1.15
SLX4Q8IY92 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.23■■□□□ 1.15
SLX4Q8IY92 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLX4Q8IY92 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLX4Q8IY92 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.23■■□□□ 1.15
SLX4Q8IY92 AC211486.1-202ENST00000416371 468 ntBASIC22.23■■□□□ 1.15
SLX4Q8IY92 LAGE3P1-201ENST00000425356 484 ntBASIC22.23■■□□□ 1.15
SLX4Q8IY92 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLX4Q8IY92 AC211476.1-201ENST00000503899 468 ntBASIC22.23■■□□□ 1.15
SLX4Q8IY92 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLX4Q8IY92 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLX4Q8IY92 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLX4Q8IY92 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLX4Q8IY92 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLX4Q8IY92 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLX4Q8IY92 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.23■■□□□ 1.15
SLX4Q8IY92 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms