Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
APLFQ8IW19 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
APLFQ8IW19 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
APLFQ8IW19 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
APLFQ8IW19 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APLFQ8IW19 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
APLFQ8IW19 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 AC126763.1-201ENST00000552015 2118 ntBASIC18.19■□□□□ 0.5
APLFQ8IW19 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
APLFQ8IW19 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.19■□□□□ 0.5
APLFQ8IW19 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.19■□□□□ 0.5
APLFQ8IW19 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
APLFQ8IW19 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
APLFQ8IW19 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.19■□□□□ 0.5
APLFQ8IW19 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.19■□□□□ 0.5
APLFQ8IW19 AC087388.1-201ENST00000571370 1112 ntBASIC18.19■□□□□ 0.5
APLFQ8IW19 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
APLFQ8IW19 AC006011.2-201ENST00000621313 1158 ntBASIC18.19■□□□□ 0.5
APLFQ8IW19 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.19■□□□□ 0.5
APLFQ8IW19 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
APLFQ8IW19 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
APLFQ8IW19 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
APLFQ8IW19 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
APLFQ8IW19 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
APLFQ8IW19 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 AC009237.14-201ENST00000609975 1594 ntBASIC18.18■□□□□ 0.5
APLFQ8IW19 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.18■□□□□ 0.5
APLFQ8IW19 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 CRYGFP-201ENST00000418459 633 ntBASIC18.18■□□□□ 0.5
APLFQ8IW19 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.18■□□□□ 0.5
APLFQ8IW19 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
APLFQ8IW19 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.18■□□□□ 0.5
APLFQ8IW19 ECEL1P2-202ENST00000465689 757 ntBASIC18.18■□□□□ 0.5
APLFQ8IW19 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.18■□□□□ 0.5
APLFQ8IW19 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
APLFQ8IW19 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.18■□□□□ 0.5
APLFQ8IW19 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.18■□□□□ 0.5
APLFQ8IW19 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.18■□□□□ 0.5
APLFQ8IW19 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
APLFQ8IW19 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.18■□□□□ 0.5
APLFQ8IW19 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
APLFQ8IW19 AC012317.2-201ENST00000623305 2251 ntBASIC18.18■□□□□ 0.5
APLFQ8IW19 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.17■□□□□ 0.5
APLFQ8IW19 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
APLFQ8IW19 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
APLFQ8IW19 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 BX664615.1-201ENST00000443558 458 ntBASIC18.17■□□□□ 0.5
APLFQ8IW19 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.17■□□□□ 0.5
APLFQ8IW19 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.17■□□□□ 0.5
APLFQ8IW19 AP000692.2-201ENST00000608391 879 ntBASIC18.17■□□□□ 0.5
APLFQ8IW19 AC130371.2-201ENST00000619443 611 ntBASIC18.17■□□□□ 0.5
APLFQ8IW19 AC018553.1-201ENST00000616682 1458 ntBASIC18.17■□□□□ 0.5
APLFQ8IW19 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
APLFQ8IW19 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.17■□□□□ 0.5
APLFQ8IW19 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.17■□□□□ 0.5
APLFQ8IW19 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
APLFQ8IW19 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.17■□□□□ 0.5
APLFQ8IW19 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.17■□□□□ 0.5
APLFQ8IW19 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APLFQ8IW19 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
APLFQ8IW19 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.17■□□□□ 0.5
APLFQ8IW19 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms