Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 EMBP1-201ENST00000458200 901 ntBASIC20.43■□□□□ 0.86
TRIM50Q86XT4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 KRT18P31-201ENST00000506277 1292 ntBASIC20.43■□□□□ 0.86
TRIM50Q86XT4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 AC099336.1-202ENST00000602961 463 ntBASIC20.43■□□□□ 0.86
TRIM50Q86XT4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 AC004870.1-201ENST00000315132 882 ntBASIC20.42■□□□□ 0.86
TRIM50Q86XT4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 KRT17P6-201ENST00000453795 1220 ntBASIC20.42■□□□□ 0.86
TRIM50Q86XT4 GUSBP12-201ENST00000513727 720 ntBASIC20.42■□□□□ 0.86
TRIM50Q86XT4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM50Q86XT4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 IGHV3-47-201ENST00000425060 335 ntBASIC20.41■□□□□ 0.86
TRIM50Q86XT4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 AC091304.2-201ENST00000564639 760 ntBASIC20.41■□□□□ 0.86
TRIM50Q86XT4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 Z69720.1-201ENST00000601483 472 ntBASIC20.41■□□□□ 0.86
TRIM50Q86XT4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 AL024508.2-201ENST00000607749 1894 ntBASIC20.41■□□□□ 0.86
TRIM50Q86XT4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM50Q86XT4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 AL121772.3-201ENST00000610840 674 ntBASIC20.4■□□□□ 0.86
TRIM50Q86XT4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM50Q86XT4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM50Q86XT4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM50Q86XT4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM50Q86XT4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM50Q86XT4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM50Q86XT4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.39■□□□□ 0.86
TRIM50Q86XT4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.39■□□□□ 0.86
TRIM50Q86XT4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM50Q86XT4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM50Q86XT4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM50Q86XT4 NSUN5P1-202ENST00000421140 1535 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms