Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LDB1Q86U70 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LDB1Q86U70 AL162741.1-201ENST00000565563 1558 ntBASIC18.33■□□□□ 0.52
LDB1Q86U70 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.33■□□□□ 0.52
LDB1Q86U70 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LDB1Q86U70 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LDB1Q86U70 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.33■□□□□ 0.52
LDB1Q86U70 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LDB1Q86U70 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LDB1Q86U70 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LDB1Q86U70 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LDB1Q86U70 REXO1L9P-201ENST00000604264 2108 ntBASIC18.32■□□□□ 0.52
LDB1Q86U70 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.32■□□□□ 0.52
LDB1Q86U70 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB1Q86U70 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB1Q86U70 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB1Q86U70 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LDB1Q86U70 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.32■□□□□ 0.52
LDB1Q86U70 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB1Q86U70 KRT18P22-201ENST00000402024 1347 ntBASIC18.32■□□□□ 0.52
LDB1Q86U70 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.32■□□□□ 0.52
LDB1Q86U70 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.32■□□□□ 0.52
LDB1Q86U70 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB1Q86U70 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.32■□□□□ 0.52
LDB1Q86U70 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB1Q86U70 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LDB1Q86U70 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.32■□□□□ 0.52
LDB1Q86U70 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.32■□□□□ 0.52
LDB1Q86U70 AC145285.6-201ENST00000604632 637 ntBASIC18.32■□□□□ 0.52
LDB1Q86U70 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LDB1Q86U70 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LDB1Q86U70 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.32■□□□□ 0.52
LDB1Q86U70 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LDB1Q86U70 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LDB1Q86U70 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
LDB1Q86U70 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LDB1Q86U70 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LDB1Q86U70 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB1Q86U70 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB1Q86U70 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.32■□□□□ 0.52
LDB1Q86U70 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LDB1Q86U70 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB1Q86U70 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.31■□□□□ 0.52
LDB1Q86U70 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.31■□□□□ 0.52
LDB1Q86U70 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB1Q86U70 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB1Q86U70 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB1Q86U70 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.31■□□□□ 0.52
LDB1Q86U70 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LDB1Q86U70 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.31■□□□□ 0.52
LDB1Q86U70 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB1Q86U70 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 AC009102.3-201ENST00000623118 1491 ntBASIC18.31■□□□□ 0.52
LDB1Q86U70 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB1Q86U70 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB1Q86U70 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB1Q86U70 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LDB1Q86U70 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LDB1Q86U70 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.31■□□□□ 0.52
LDB1Q86U70 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB1Q86U70 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LDB1Q86U70 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LDB1Q86U70 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB1Q86U70 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.3■□□□□ 0.52
LDB1Q86U70 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.3■□□□□ 0.52
LDB1Q86U70 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB1Q86U70 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB1Q86U70 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.3■□□□□ 0.52
LDB1Q86U70 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.3■□□□□ 0.52
LDB1Q86U70 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB1Q86U70 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB1Q86U70 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.3■□□□□ 0.52
LDB1Q86U70 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.3■□□□□ 0.52
LDB1Q86U70 AC010203.1-204ENST00000548782 407 ntBASIC18.3■□□□□ 0.52
LDB1Q86U70 AC104390.1-201ENST00000555663 520 ntBASIC18.3■□□□□ 0.52
LDB1Q86U70 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.3■□□□□ 0.52
LDB1Q86U70 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.3■□□□□ 0.52
LDB1Q86U70 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB1Q86U70 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB1Q86U70 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LDB1Q86U70 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LDB1Q86U70 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.3■□□□□ 0.52
LDB1Q86U70 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.3■□□□□ 0.52
LDB1Q86U70 GMCL1P1-201ENST00000463439 1581 ntBASIC18.3■□□□□ 0.52
LDB1Q86U70 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.29■□□□□ 0.52
LDB1Q86U70 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.29■□□□□ 0.52
LDB1Q86U70 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LDB1Q86U70 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.29■□□□□ 0.52
LDB1Q86U70 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms