Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 FEM1AP3-201ENST00000403722 1741 ntBASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 AC009947.1-201ENST00000444350 727 ntBASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 AP003733.1-201ENST00000491725 852 ntBASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 ALG1L5P-201ENST00000482043 771 ntBASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 AL596442.2-201ENST00000610240 980 ntBASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 RBM17P3-201ENST00000417687 1192 ntBASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 KRT89P-201ENST00000620027 1478 ntBASIC11.28□□□□□ -0.6
VPS13BQ7Z7G8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC11.27□□□□□ -0.6
VPS13BQ7Z7G8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
VPS13BQ7Z7G8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VPS13BQ7Z7G8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.27□□□□□ -0.6
VPS13BQ7Z7G8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.6
VPS13BQ7Z7G8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.27□□□□□ -0.6
VPS13BQ7Z7G8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC11.27□□□□□ -0.6
VPS13BQ7Z7G8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.27□□□□□ -0.6
VPS13BQ7Z7G8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.27□□□□□ -0.6
VPS13BQ7Z7G8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
VPS13BQ7Z7G8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 INTS4P1-201ENST00000438455 1935 ntBASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 HLA-J-202ENST00000469281 1241 ntBASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms