Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 AC004951.3-201ENST00000418645 1148 ntBASIC16.6■□□□□ 0.25
SHFQ7M4L6 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.6■□□□□ 0.25
SHFQ7M4L6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 HTR7P1-201ENST00000538670 1336 ntBASIC16.6■□□□□ 0.25
SHFQ7M4L6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.6■□□□□ 0.25
SHFQ7M4L6 RCC2P3-201ENST00000418112 1537 ntBASIC16.6■□□□□ 0.25
SHFQ7M4L6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHFQ7M4L6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.59■□□□□ 0.25
SHFQ7M4L6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.59■□□□□ 0.25
SHFQ7M4L6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHFQ7M4L6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SHFQ7M4L6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SHFQ7M4L6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.58■□□□□ 0.25
SHFQ7M4L6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SHFQ7M4L6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 AC006058.3-201ENST00000606217 1069 ntBASIC16.58■□□□□ 0.24
SHFQ7M4L6 AC073648.6-201ENST00000641589 218 ntBASIC16.58■□□□□ 0.24
SHFQ7M4L6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms