Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 FEM1AP3-201ENST00000403722 1741 ntBASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 TEX21P-204ENST00000641479 1693 ntBASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 AC092647.4-201ENST00000457211 535 ntBASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 KRT8P3-201ENST00000519669 1449 ntBASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 NOC2LP1-202ENST00000452600 2235 ntBASIC16.92■□□□□ 0.3
CHMP1BQ7LBR1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 AC141586.3-201ENST00000562166 1838 ntBASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 MCCD1P1-208ENST00000445732 328 ntBASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 DUX4L26-201ENST00000489078 1255 ntBASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 AL138966.2-201ENST00000621997 464 ntBASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP1BQ7LBR1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 KRT8P45-201ENST00000414328 1447 ntBASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 FP475955.4-201ENST00000623131 1990 ntBASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 ARMC10P1-201ENST00000313754 855 ntBASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHMP1BQ7LBR1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms