Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 KRT8P11-201ENST00000409686 1436 ntBASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 KRT8P32-201ENST00000512863 1461 ntBASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTCHD4Q6ZW05 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTCHD4Q6ZW05 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PTCHD4Q6ZW05 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.89■□□□□ 0.3
PTCHD4Q6ZW05 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
PTCHD4Q6ZW05 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTCHD4Q6ZW05 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 AL357033.4-201ENST00000617703 1807 ntBASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 NIFKP9-201ENST00000419265 221 ntBASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 AC004980.1-204ENST00000429707 299 ntBASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 MIR4651-201ENST00000582622 73 ntBASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCHD4Q6ZW05 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 KRT8P45-201ENST00000414328 1447 ntBASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms