Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 AC106886.4-201ENST00000623557 2502 ntBASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 AC092850.2-201ENST00000623821 2697 ntBASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 TFP1-202ENST00000475455 1573 ntBASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LINC00173Q6ZV60 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 AGGF1P2-201ENST00000426656 2106 ntBASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00173Q6ZV60 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms