Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 AFG3L1P-217ENST00000557444 2447 ntBASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 AC112777.1-201ENST00000540175 1423 ntBASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC149Q6ZUS6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 MIR574-201ENST00000385209 96 ntBASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 FAM197Y8-203ENST00000450145 560 ntBASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC149Q6ZUS6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 KRT18P67-201ENST00000432816 1264 ntBASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 AF186996.4-201ENST00000467186 377 ntBASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 AC091607.1-201ENST00000490318 1060 ntBASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC149Q6ZUS6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 AL031284.1-201ENST00000419297 478 ntBASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 AC093909.1-201ENST00000504731 1122 ntBASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 RNA5SP419-201ENST00000515908 135 ntBASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms