Protein–RNA interactions for Protein: Q63HK3

ZKSCAN2, Zinc finger protein with KRAB and SCAN domains 2, humanhuman

Predictions only

Length 967 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN2Q63HK3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 AC018470.1-201ENST00000624790 3129 ntBASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 LIN28AP1-201ENST00000429574 405 ntBASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 GCSHP2-201ENST00000560971 527 ntBASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 AL023973.1-201ENST00000624619 620 ntBASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZKSCAN2Q63HK3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 TERF1P1-201ENST00000311003 1181 ntBASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 AC211429.1-201ENST00000415277 523 ntBASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC23.36■■□□□ 1.33
ZKSCAN2Q63HK3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 AC073508.3-201ENST00000619697 1419 ntBASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 AL137013.1-201ENST00000432946 1228 ntBASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 ATP5G1P1-201ENST00000448724 379 ntBASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 AL157888.1-201ENST00000631930 593 ntBASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZKSCAN2Q63HK3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZKSCAN2Q63HK3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms