Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCP2Q5VXM1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCP2Q5VXM1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCP2Q5VXM1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDCP2Q5VXM1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCP2Q5VXM1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDCP2Q5VXM1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 PGAM5P1-201ENST00000518923 814 ntBASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 IGHV3-22-201ENST00000520721 359 ntBASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 AC009154.2-201ENST00000621177 724 ntBASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCP2Q5VXM1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 FAM220CP-201ENST00000395253 831 ntBASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 MTCL1P1-201ENST00000446207 792 ntBASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 AC021087.4-201ENST00000563761 564 ntBASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 AC125634.1-201ENST00000438758 1403 ntBASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 AP005117.1-201ENST00000584346 1413 ntBASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDCP2Q5VXM1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCP2Q5VXM1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms