Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 AC104417.2-201ENST00000562989 1793 ntBASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 IGHV3-65-201ENST00000523210 341 ntBASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 AC006504.4-201ENST00000592118 1568 ntBASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.5■□□□□ 0.87
COL13A1Q5TAT6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 AC113404.2-201ENST00000507884 177 ntBASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 AL512356.2-201ENST00000546955 174 ntBASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 RN7SL190P-201ENST00000582519 257 ntBASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.49■□□□□ 0.87
COL13A1Q5TAT6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 AC140878.1-201ENST00000565277 250 ntBASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 MIR4538-201ENST00000581377 78 ntBASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 AL162274.1-201ENST00000617191 1098 ntBASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL13A1Q5TAT6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 RHOQP3-201ENST00000437982 621 ntBASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 AC068587.9-201ENST00000641814 219 ntBASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.47■□□□□ 0.87
COL13A1Q5TAT6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 TIMM8BP1-201ENST00000452384 211 ntBASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 AC069335.1-201ENST00000489972 472 ntBASIC20.46■□□□□ 0.87
COL13A1Q5TAT6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms